Browse of TCMCG051C04613 protein

CDS

Accession Number	TCMCG051C04613
gbkey	CDS
Protein Id	XP_024442863.1
Location	complement(join(37003288..37003356,37003490..37003658,37003739..37003842,37004112..37004201,37004301..37004369,37004486..37004619,37004694..37004784,37004930..37005010,37005869..37005994,37006077..37006233,37006351..37006445,37006586..37006645,37006893..37006973,37007351..37007545,37007713..37008825))
Gene	LOC7470821
GeneID	7470821
Organism	Populus trichocarpa

Protein

Length	877aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA17973
db_source	XM_024587095.1
Definition	DNA topoisomerase 1 beta [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category	L
Description	DNA topoisomerase
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03032        [VIEW IN KEGG]
KEGG_ko	ko:K03163        [VIEW IN KEGG]
EC	5.99.1.2        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	-
GOs	GO:0000228        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0003916        [VIEW IN EMBL-EBI] GO:0003917        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005657        [VIEW IN EMBL-EBI] GO:0005694        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006260        [VIEW IN EMBL-EBI] GO:0006265        [VIEW IN EMBL-EBI] GO:0006325        [VIEW IN EMBL-EBI] GO:0006338        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0007059        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009058        [VIEW IN EMBL-EBI] GO:0009059        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0016853        [VIEW IN EMBL-EBI] GO:0031298        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034645        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0043596        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044249        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044427        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044454        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0051276        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071103        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0140097        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGATGTTCAAGCACCTCCAAAGCTAATTCCCAATAATTTCAACGATGATGATGATGATGATGATGGGCCCATAGTTTTCAAGAGGGGTGGTAACTCAACATCGAAGCAGAATCAATTAAACCCTGAAGCGAAGAAACCGTCTTCATCTTCTCAGAATTCCAATGGTCAAAGCTTGAATTTGCAGAAGGGTAAATCGCCTATTCCATCTTCCAATGCATCCCCTATGAAATCTTCTACAGGGAGCCCTAAAGCATCAGCTTCATCTGCCAAGGCATCCCCGTTGAAGTCACCACTGACATATACTAGAGCACTCACTTCTTCAAATGATCAGTTGAAGCAGGCATCTAAACAGGTTGTCTCAAATGCTGTTAAGGAGGAGACGAAATCGATTGTGGATGATGAGGATTCCGAGGATGATAAGCCCTTGAGTTCTAGAATTAAGGGGAGTACAAACAATGTCAATAAAGTGGTTACTGCACCTGCTCATGTCAAGGATGAGCCTTCAGATGATGATGAAGTTCCTTTATCCTCGAGGTTTGCAATGAAGTCAAATGCAGGGACATCAAGTAGTAAGTCTATCAGATCTAGTGAGATAAGACCTTTTCCTTCTAAAAGTCAGCTAAATGGTTCTACTAAAAATGACAAGCAACAGAAATCTTCTGTGGTGCCAACTAAGAGACCTATGGATAATAAGGTTCCTTCAAACCATTCTTCTGCTAAAAAACCAAAACTTTTAGATGCATGTACAACAACAAAAGTTAAGCAAGTTACTGTGAAGGTTGAGCAGAAGGCAGATGATGATGACCACCTTACAATTTCCCAGAGAATGAAGAAGGCGGACTCCTCAGCTAACAAATCATCATTTGCAAAGAAAAAGGTTACAAAAGTTGTTTCTTCGTCATTGAAGAAGACGACTCAGAAGAACAAGAAACAAATGAAAAATTCAAAATATTCAAAGTCAACAAAAGTGCAGCCTGGCTCCAGTGATGGCCAGAAAAAATGGACTACCTTAGTTCACAATGGTGTCATCTTCCCACCTCCATACAAGCCTCATGGGGTTAAGATTCTTTACAAGGGGAAACCAATTGATTTGACTCCTGAACAAGAGGAAGTTGCAACCATGTTTGCAGTGATGAAAGATACAGACTATGTTCAAAAACCACAATTCCGTCAAAACTTTTGGAACGATTGGCGTAAATTACTAGGGAAAAATCATGTAATACAGAAGCTAGATGACTGTGATTTCAACCCCATATATGAATGGCATCAGCAAGAAAAGGAGAAGAAGAAACAAATGAGTACTGAAGAGAAAAAGGTCTTGAAAGAAGAGAAATTGAAGCAAGAGGAGAAGTACATGTGGGCCATTGTTAATGGTGTTAAAGAGAAGGTTGGGAATTTCAGAGTAGAACCACCGGGTCTATTTCGAGGACGGGGAGAGCATCCAAAGATGGGGAAGCTGAAAAGCCGAATTCGTCCCAGTGACATTACTATAAATATTGGAAAGGATGCACCTATCCCGGAATGTCCTATTCCTGGTGAAAGGTGGAAAGAAGTGAAGCATGATAATACTGTTACATGGTTGGCGTTCTGGAATGATCCAATCAATCCAAAAGAATTCAAGTATGTATTCTTAGCTGCGAGCAGTTCCTTGAAGGGGCAAAGTGACAAGGAGAAATACGAGAAAGCAAGGAAGTTGAAGGACTATATACACAACATCAGAGCAGCTTACACAAAGGATTTTGCAAGTAAAGATATTACGAAGCGGCAAATAGCAGTGGCAACCTATCTTATTGATAAGCTAGCTCTGAGGGCGGGTAATGAGAAGGATGATGATGAAGCTGATACTGTTGGTTGCTGCACATTAAAAGTAGCAAATGTTGAGTGCATCCCTCCAAATAAGCTGAAGTTTGACTTCCTTGGTAAAGATTCAATTCGATATGAAAACACGGTCGAGGTTGAGCTTCCTGTGTACAAGGCAATTGGACATTTTCAAGTTGCAAAAAAGCAAACTGATGATCTTTTTGACTCACTGGATACATCTAAACTAAATGCTCACCTAAAAGAACTCATGCCTGGCCTCACAGCAAAAGTTTTTCGTACATACAATGCATCAATTACATTGGATGAAAAGTTATATGAGGAAACAGAAGATGGTGATGTTGCTGAAAAAATTGTCATTTACAACCAAGCAAACAAACAGGTTGCAATCATTTGTAATCATCAACGAACCATTTCAAAATCTCATGATGCACAAATGTCAAGATTGACTGAGAAAATTGAGGAACTTAAGAGCACGCTTAAGGAGTTGAAAACTGATCTGGACAGGGCCAAAAAGGGGAAGCCCCCATTGAAGGGTGCAGATGGAAAGCAAAAGAGGAGCTTGACTCCTGAAGCAATAGAGAAGAAGATAGCAACAACCAATCAAAAGATTGAGAAAATGGAAATGGCCATGAAGACCAAAGAGGATCTGAAAACAGTGGCATTGGGGACGTCCAAGATTAACTACCTTGATCCTAGGATCACAGTTGCGTGGTGCAAGCGGCATGAAGTTCCTATTGATAAGATATTCAACAAGTCTCTCTTAGCAAAGTTTACCTGGGCGATGGACGTTGACCCCCAATTCAGATTCTGA

Protein:   MDVQAPPKLIPNNFNDDDDDDDGPIVFKRGGNSTSKQNQLNPEAKKPSSSSQNSNGQSLNLQKGKSPIPSSNASPMKSSTGSPKASASSAKASPLKSPLTYTRALTSSNDQLKQASKQVVSNAVKEETKSIVDDEDSEDDKPLSSRIKGSTNNVNKVVTAPAHVKDEPSDDDEVPLSSRFAMKSNAGTSSSKSIRSSEIRPFPSKSQLNGSTKNDKQQKSSVVPTKRPMDNKVPSNHSSAKKPKLLDACTTTKVKQVTVKVEQKADDDDHLTISQRMKKADSSANKSSFAKKKVTKVVSSSLKKTTQKNKKQMKNSKYSKSTKVQPGSSDGQKKWTTLVHNGVIFPPPYKPHGVKILYKGKPIDLTPEQEEVATMFAVMKDTDYVQKPQFRQNFWNDWRKLLGKNHVIQKLDDCDFNPIYEWHQQEKEKKKQMSTEEKKVLKEEKLKQEEKYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKSRIRPSDITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHNIRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVANVECIPPNKLKFDFLGKDSIRYENTVEVELPVYKAIGHFQVAKKQTDDLFDSLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEKIVIYNQANKQVAIICNHQRTISKSHDAQMSRLTEKIEELKSTLKELKTDLDRAKKGKPPLKGADGKQKRSLTPEAIEKKIATTNQKIEKMEMAMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIDKIFNKSLLAKFTWAMDVDPQFRF